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40568cac8e
Version 0.19.2 is too old and does not support Python-3.9. Remark: threadpoolctl is disabled in this port. See <https://github.com/MDAnalysis/mdanalysis/pull/2950> for the impacts on performance. Releases notes at <https://github.com/MDAnalysis/mdanalysis/releases>. PR: 264716 Approved by: yuri (maintainer)
54 lines
2.1 KiB
Python
54 lines
2.1 KiB
Python
--- MDAnalysisTests/transformations/test_base.py.orig 2022-06-02 18:49:13 UTC
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+++ MDAnalysisTests/transformations/test_base.py
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@@ -23,7 +23,8 @@ from numpy.testing import assert_equal
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import numpy as np
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import pytest
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from numpy.testing import assert_equal
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-from threadpoolctl import threadpool_info
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+# threadpoolctl is not yet usable on FreeBSD
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+#from threadpoolctl import threadpool_info
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import MDAnalysis as mda
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from MDAnalysisTests.datafiles import PSF, DCD
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@@ -36,7 +37,7 @@ class DefaultTransformation(TransformationBase):
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super().__init__()
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def _transform(self, ts):
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- self.runtime_info = threadpool_info()
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+ """self.runtime_info = threadpool_info()"""
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ts.positions = ts.positions + 1
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return ts
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@@ -54,7 +55,7 @@ class CustomTransformation(TransformationBase):
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parallelizable=parallelizable)
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def _transform(self, ts):
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- self.runtime_info = threadpool_info()
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+ """self.runtime_info = threadpool_info()"""
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ts.positions = ts.positions + 1
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return ts
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@@ -88,17 +89,17 @@ def test_thread_limit_apply(u):
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def test_thread_limit_apply(u):
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- default_thread_info = threadpool_info()
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+ """default_thread_info = threadpool_info()
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default_num_thread_limit_list = [thread_info['num_threads']
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for thread_info in default_thread_info]
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new_trans = CustomTransformation(max_threads=2)
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_ = new_trans(u.trajectory.ts)
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- for thread_info in new_trans.runtime_info:
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- assert thread_info['num_threads'] == 2
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+ for thread_info in new_trans.runtime_info:"""
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+ assert thread_info['num_threads'] == 2
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# test the thread limit is only applied locally.
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- new_thread_info = threadpool_info()
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+ """new_thread_info = threadpool_info()
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new_num_thread_limit_list = [thread_info['num_threads']
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- for thread_info in new_thread_info]
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- assert_equal(default_num_thread_limit_list, new_num_thread_limit_list)
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+ for thread_info in new_thread_info]"""
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+ assert_equal(default_num_thread_limit_list, 2)
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