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Upgrade tinker to the latest revision

Browse source 
PR:		33425
Submitted by:	maintainer
This commit is contained in:
Ying-Chieh Liao 2002-01-19 15:15:16 +00:00
parent e4eecb83b6
commit ec822f7631
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=53339
5 changed files with 101 additions and 64 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

7
biology/tinker/Makefile
View file

@ -7,6 +7,7 @@
PORTNAME= tinker PORTNAME= tinker
PORTVERSION= 3.9 PORTVERSION= 3.9
PORTREVISION= 1
CATEGORIES= biology CATEGORIES= biology
MASTER_SITES= ftp://dasher.wustl.edu/pub/ MASTER_SITES= ftp://dasher.wustl.edu/pub/
DISTNAME= ${PORTNAME} DISTNAME= ${PORTNAME}
@ -28,7 +29,7 @@ pre-fetch:
@${ECHO_MSG} If you get a CHECKSUM mismatch, try doing a \'make distclean\' first. @${ECHO_MSG} If you get a CHECKSUM mismatch, try doing a \'make distclean\' first.
@${ECHO_MSG} "" @${ECHO_MSG} ""
.if defined(WANT_VIEWER) .if defined(WITH_VIEWER)
.if ${XFREE86_VERSION} == 3 .if ${XFREE86_VERSION} == 3
BUILD_DEPENDS+= imake:${PORTSDIR}/devel/imake BUILD_DEPENDS+= imake:${PORTSDIR}/devel/imake
.elif ${XFREE86_VERSION} == 4 .elif ${XFREE86_VERSION} == 4
@ -42,7 +43,7 @@ post-build:
pre-extract: pre-extract:
@${ECHO} "" @${ECHO} ""
@${ECHO} If you would like to also build @${ECHO} If you would like to also build
@${ECHO} the molecular viewer, define WANT_VIEWER. @${ECHO} the molecular viewer, define WITH_VIEWER.
@${ECHO} "" @${ECHO} ""
.endif .endif
@ -114,7 +115,7 @@ ${PREFIX}/share/tinker/bench
@${INSTALL_DATA} ${WRKDIR}/tinker/test/* ${PREFIX}/share/tinker/test @${INSTALL_DATA} ${WRKDIR}/tinker/test/* ${PREFIX}/share/tinker/test
.endif .endif
.if defined(WANT_VIEWER) .if defined(WITH_VIEWER)
@${MKDIR} ${PREFIX}/share/tinker/rasmol @${MKDIR} ${PREFIX}/share/tinker/rasmol
@${INSTALL_PROGRAM} ${WRKDIR}/tinker/rasmol/tview-* ${PREFIX}/bin @${INSTALL_PROGRAM} ${WRKDIR}/tinker/rasmol/tview-* ${PREFIX}/bin
@${INSTALL_SCRIPT} ${FILESDIR}/tview ${PREFIX}/bin @${INSTALL_SCRIPT} ${FILESDIR}/tview ${PREFIX}/bin

2
biology/tinker/distinfo
View file

@ -1 +1 @@
MD5 (tinker.tar.gz) = a48fc15fe668f8e41d0cc3316a582928 MD5 (tinker.tar.gz) = e6f34c61cc40f107fbbcf4b0c7dae5a5

20
biology/tinker/files/patch-aa
View file

@ -1,5 +1,5 @@
--- ../make/Makefile.orig Sat Jul 21 10:04:48 2001 --- ../make/Makefile.orig Tue Nov 13 10:16:27 2001
+++ ../make/Makefile Wed Sep 5 13:51:19 2001 +++ ../make/Makefile Mon Dec 31 15:33:40 2001
@@ -9,8 +9,8 @@ @@ -9,8 +9,8 @@
## ##
## 1. make all Build all the TINKER executables ## 1. make all Build all the TINKER executables
@ -68,7 +68,7 @@
################################################################# #################################################################
## Should not be Necessary to Change Things Below this Point ## ## Should not be Necessary to Change Things Below this Point ##
################################################################# #################################################################
@@ -494,11 +512,13 @@ @@ -497,11 +515,13 @@
xyzpdb.x \ xyzpdb.x \
xyzsybyl.x xyzsybyl.x
@ -84,7 +84,7 @@
all: ${EXEFILES} all: ${EXEFILES}
@@ -509,57 +529,57 @@ @@ -512,58 +532,58 @@
cat *.i *.f > tinker.txt cat *.i *.f > tinker.txt
rename: rename:
@ -104,6 +104,7 @@
- mv minimize.x $(BINDIR)/minimize - mv minimize.x $(BINDIR)/minimize
- mv minirot.x $(BINDIR)/minirot - mv minirot.x $(BINDIR)/minirot
- mv minrigid.x $(BINDIR)/minrigid - mv minrigid.x $(BINDIR)/minrigid
- mv monte.x $(BINDIR)/monte
- mv newton.x $(BINDIR)/newton - mv newton.x $(BINDIR)/newton
- mv newtrot.x $(BINDIR)/newtrot - mv newtrot.x $(BINDIR)/newtrot
- mv nucleic.x $(BINDIR)/nucleic - mv nucleic.x $(BINDIR)/nucleic
@ -155,6 +156,7 @@
+ ${INSTALL_PROGRAM} minimize.x $(BINDIR)/minimize + ${INSTALL_PROGRAM} minimize.x $(BINDIR)/minimize
+ ${INSTALL_PROGRAM} minirot.x $(BINDIR)/minirot + ${INSTALL_PROGRAM} minirot.x $(BINDIR)/minirot
+ ${INSTALL_PROGRAM} minrigid.x $(BINDIR)/minrigid + ${INSTALL_PROGRAM} minrigid.x $(BINDIR)/minrigid
+ ${INSTALL_PROGRAM} monte.x $(BINDIR)/monte
+ ${INSTALL_PROGRAM} newton.x $(BINDIR)/newton + ${INSTALL_PROGRAM} newton.x $(BINDIR)/newton
+ ${INSTALL_PROGRAM} newtrot.x $(BINDIR)/newtrot + ${INSTALL_PROGRAM} newtrot.x $(BINDIR)/newtrot
+ ${INSTALL_PROGRAM} nucleic.x $(BINDIR)/nucleic + ${INSTALL_PROGRAM} nucleic.x $(BINDIR)/nucleic
@ -193,13 +195,3 @@
remove_links: remove_links:
rm -f $(LINKDIR)/alchemy rm -f $(LINKDIR)/alchemy
@@ -682,8 +702,8 @@
bspline.o \
calendar.o \
center.o \
- chkxyz.o \
cholesky.o \
+ chkxyz.o \
clock.o \
cluster.o \
column.o \

66
biology/tinker/pkg-plist
View file

@ -14,6 +14,7 @@ bin/intxyz
bin/minimize bin/minimize
bin/minirot bin/minirot
bin/minrigid bin/minrigid
bin/monte
bin/newton bin/newton
bin/newtrot bin/newtrot
bin/nucleic bin/nucleic
@ -139,19 +140,18 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/bench/results-3.7 %%PORTDOCS%%share/tinker/bench/results-3.7
%%PORTDOCS%%share/tinker/bench/results-3.8 %%PORTDOCS%%share/tinker/bench/results-3.8
%%PORTDOCS%%share/tinker/bench/results-3.9 %%PORTDOCS%%share/tinker/bench/results-3.9
%%PORTDOCS%%share/tinker/params/README share/tinker/params/README
%%PORTDOCS%%share/tinker/params/amber.prm share/tinker/params/amber.prm
%%PORTDOCS%%share/tinker/params/charmm.prm share/tinker/params/charmm.prm
%%PORTDOCS%%share/tinker/params/dudek.prm share/tinker/params/hoch.prm
%%PORTDOCS%%share/tinker/params/hoch.prm share/tinker/params/mm2.prm
%%PORTDOCS%%share/tinker/params/mm2.prm share/tinker/params/mm3.prm
%%PORTDOCS%%share/tinker/params/mm3.prm share/tinker/params/mm3pro.prm
%%PORTDOCS%%share/tinker/params/mm3pro.prm share/tinker/params/opls.prm
%%PORTDOCS%%share/tinker/params/opls.prm share/tinker/params/oplsaa.prm
%%PORTDOCS%%share/tinker/params/oplsaa.prm share/tinker/params/smooth.prm
%%PORTDOCS%%share/tinker/params/smooth.prm share/tinker/params/smoothaa.prm
%%PORTDOCS%%share/tinker/params/smoothaa.prm share/tinker/params/water.prm
%%PORTDOCS%%share/tinker/params/water.prm
%%PORTDOCS%%share/tinker/test/README %%PORTDOCS%%share/tinker/test/README
%%PORTDOCS%%share/tinker/test/ala20.key %%PORTDOCS%%share/tinker/test/ala20.key
%%PORTDOCS%%share/tinker/test/ala20.xyz %%PORTDOCS%%share/tinker/test/ala20.xyz
@ -182,6 +182,9 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/bowl2.xyz %%PORTDOCS%%share/tinker/test/bowl2.xyz
%%PORTDOCS%%share/tinker/test/bowl3.key %%PORTDOCS%%share/tinker/test/bowl3.key
%%PORTDOCS%%share/tinker/test/bowl3.xyz %%PORTDOCS%%share/tinker/test/bowl3.xyz
%%PORTDOCS%%share/tinker/test/bucky.int
%%PORTDOCS%%share/tinker/test/bucky.key
%%PORTDOCS%%share/tinker/test/bucky.xyz
%%PORTDOCS%%share/tinker/test/butane.int %%PORTDOCS%%share/tinker/test/butane.int
%%PORTDOCS%%share/tinker/test/butane.key %%PORTDOCS%%share/tinker/test/butane.key
%%PORTDOCS%%share/tinker/test/butane.xyz %%PORTDOCS%%share/tinker/test/butane.xyz
@ -202,12 +205,12 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/c5.key %%PORTDOCS%%share/tinker/test/c5.key
%%PORTDOCS%%share/tinker/test/c5.seq %%PORTDOCS%%share/tinker/test/c5.seq
%%PORTDOCS%%share/tinker/test/c5.xyz %%PORTDOCS%%share/tinker/test/c5.xyz
%%PORTDOCS%%share/tinker/test/c7ax.key %%PORTDOCS%%share/tinker/test/c7a.key
%%PORTDOCS%%share/tinker/test/c7ax.seq %%PORTDOCS%%share/tinker/test/c7a.seq
%%PORTDOCS%%share/tinker/test/c7ax.xyz %%PORTDOCS%%share/tinker/test/c7a.xyz
%%PORTDOCS%%share/tinker/test/c7eq.key %%PORTDOCS%%share/tinker/test/c7e.key
%%PORTDOCS%%share/tinker/test/c7eq.seq %%PORTDOCS%%share/tinker/test/c7e.seq
%%PORTDOCS%%share/tinker/test/c7eq.xyz %%PORTDOCS%%share/tinker/test/c7e.xyz
%%PORTDOCS%%share/tinker/test/calmodulin.key %%PORTDOCS%%share/tinker/test/calmodulin.key
%%PORTDOCS%%share/tinker/test/calmodulin.pdb %%PORTDOCS%%share/tinker/test/calmodulin.pdb
%%PORTDOCS%%share/tinker/test/calmodulin.seq %%PORTDOCS%%share/tinker/test/calmodulin.seq
@ -245,6 +248,9 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/diene.xyz %%PORTDOCS%%share/tinker/test/diene.xyz
%%PORTDOCS%%share/tinker/test/dimethane.key %%PORTDOCS%%share/tinker/test/dimethane.key
%%PORTDOCS%%share/tinker/test/dimethane.xyz %%PORTDOCS%%share/tinker/test/dimethane.xyz
%%PORTDOCS%%share/tinker/test/diwater.key
%%PORTDOCS%%share/tinker/test/diwater.lin
%%PORTDOCS%%share/tinker/test/diwater.xyz
%%PORTDOCS%%share/tinker/test/enkephalin.int %%PORTDOCS%%share/tinker/test/enkephalin.int
%%PORTDOCS%%share/tinker/test/enkephalin.key %%PORTDOCS%%share/tinker/test/enkephalin.key
%%PORTDOCS%%share/tinker/test/enkephalin.make %%PORTDOCS%%share/tinker/test/enkephalin.make
@ -271,6 +277,7 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/form.xyz %%PORTDOCS%%share/tinker/test/form.xyz
%%PORTDOCS%%share/tinker/test/formbig.key %%PORTDOCS%%share/tinker/test/formbig.key
%%PORTDOCS%%share/tinker/test/formbig.xyz %%PORTDOCS%%share/tinker/test/formbig.xyz
%%PORTDOCS%%share/tinker/test/formbox.dyn
%%PORTDOCS%%share/tinker/test/formbox.key %%PORTDOCS%%share/tinker/test/formbox.key
%%PORTDOCS%%share/tinker/test/formbox.xyz %%PORTDOCS%%share/tinker/test/formbox.xyz
%%PORTDOCS%%share/tinker/test/furan.int %%PORTDOCS%%share/tinker/test/furan.int
@ -292,6 +299,7 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/hexanes.key %%PORTDOCS%%share/tinker/test/hexanes.key
%%PORTDOCS%%share/tinker/test/hexanes.run %%PORTDOCS%%share/tinker/test/hexanes.run
%%PORTDOCS%%share/tinker/test/hexanes.xyz %%PORTDOCS%%share/tinker/test/hexanes.xyz
%%PORTDOCS%%share/tinker/test/hexanex.xyz
%%PORTDOCS%%share/tinker/test/imidazole.int %%PORTDOCS%%share/tinker/test/imidazole.int
%%PORTDOCS%%share/tinker/test/imidazole.key %%PORTDOCS%%share/tinker/test/imidazole.key
%%PORTDOCS%%share/tinker/test/imidazole.xyz %%PORTDOCS%%share/tinker/test/imidazole.xyz
@ -300,10 +308,14 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/imine.xyz %%PORTDOCS%%share/tinker/test/imine.xyz
%%PORTDOCS%%share/tinker/test/lactam.key %%PORTDOCS%%share/tinker/test/lactam.key
%%PORTDOCS%%share/tinker/test/lactam.xyz %%PORTDOCS%%share/tinker/test/lactam.xyz
%%PORTDOCS%%share/tinker/test/lipid.key
%%PORTDOCS%%share/tinker/test/lipid.xyz
%%PORTDOCS%%share/tinker/test/melittin.key %%PORTDOCS%%share/tinker/test/melittin.key
%%PORTDOCS%%share/tinker/test/melittin.pdb %%PORTDOCS%%share/tinker/test/melittin.pdb
%%PORTDOCS%%share/tinker/test/melittin.seq %%PORTDOCS%%share/tinker/test/melittin.seq
%%PORTDOCS%%share/tinker/test/melittin.xyz %%PORTDOCS%%share/tinker/test/melittin.xyz
%%PORTDOCS%%share/tinker/test/membrane.key
%%PORTDOCS%%share/tinker/test/membrane.xyz
%%PORTDOCS%%share/tinker/test/methane.int %%PORTDOCS%%share/tinker/test/methane.int
%%PORTDOCS%%share/tinker/test/methane.key %%PORTDOCS%%share/tinker/test/methane.key
%%PORTDOCS%%share/tinker/test/methane.xyz %%PORTDOCS%%share/tinker/test/methane.xyz
@ -314,6 +326,9 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/naphthalene.int %%PORTDOCS%%share/tinker/test/naphthalene.int
%%PORTDOCS%%share/tinker/test/naphthalene.key %%PORTDOCS%%share/tinker/test/naphthalene.key
%%PORTDOCS%%share/tinker/test/naphthalene.xyz %%PORTDOCS%%share/tinker/test/naphthalene.xyz
%%PORTDOCS%%share/tinker/test/nitrogen.dyn
%%PORTDOCS%%share/tinker/test/nitrogen.key
%%PORTDOCS%%share/tinker/test/nitrogen.xyz
%%PORTDOCS%%share/tinker/test/nma.int %%PORTDOCS%%share/tinker/test/nma.int
%%PORTDOCS%%share/tinker/test/nma.key %%PORTDOCS%%share/tinker/test/nma.key
%%PORTDOCS%%share/tinker/test/nma.xyz %%PORTDOCS%%share/tinker/test/nma.xyz
@ -342,6 +357,8 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/peptide.xyz %%PORTDOCS%%share/tinker/test/peptide.xyz
%%PORTDOCS%%share/tinker/test/phenanth.key %%PORTDOCS%%share/tinker/test/phenanth.key
%%PORTDOCS%%share/tinker/test/phenanth.xyz %%PORTDOCS%%share/tinker/test/phenanth.xyz
%%PORTDOCS%%share/tinker/test/pol3.key
%%PORTDOCS%%share/tinker/test/pol3.xyz
%%PORTDOCS%%share/tinker/test/propane.key %%PORTDOCS%%share/tinker/test/propane.key
%%PORTDOCS%%share/tinker/test/propane.ray %%PORTDOCS%%share/tinker/test/propane.ray
%%PORTDOCS%%share/tinker/test/propane.xyz %%PORTDOCS%%share/tinker/test/propane.xyz
@ -358,6 +375,8 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/pyrrole.xyz %%PORTDOCS%%share/tinker/test/pyrrole.xyz
%%PORTDOCS%%share/tinker/test/retinoic.key %%PORTDOCS%%share/tinker/test/retinoic.key
%%PORTDOCS%%share/tinker/test/retinoic.xyz %%PORTDOCS%%share/tinker/test/retinoic.xyz
%%PORTDOCS%%share/tinker/test/skunk.key
%%PORTDOCS%%share/tinker/test/skunk.xyz
%%PORTDOCS%%share/tinker/test/sterol.key %%PORTDOCS%%share/tinker/test/sterol.key
%%PORTDOCS%%share/tinker/test/sterol.xyz %%PORTDOCS%%share/tinker/test/sterol.xyz
%%PORTDOCS%%share/tinker/test/styrene.int %%PORTDOCS%%share/tinker/test/styrene.int
@ -394,13 +413,16 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/watersmall.dyn %%PORTDOCS%%share/tinker/test/watersmall.dyn
%%PORTDOCS%%share/tinker/test/watersmall.key %%PORTDOCS%%share/tinker/test/watersmall.key
%%PORTDOCS%%share/tinker/test/watersmall.xyz %%PORTDOCS%%share/tinker/test/watersmall.xyz
%%PORTDOCS%%share/tinker/test/watertiny.dyn
%%PORTDOCS%%share/tinker/test/watertiny.key
%%PORTDOCS%%share/tinker/test/watertiny.xyz
%%PORTDOCS%%share/tinker/test/white.int %%PORTDOCS%%share/tinker/test/white.int
%%PORTDOCS%%share/tinker/test/white.key %%PORTDOCS%%share/tinker/test/white.key
%%PORTDOCS%%share/tinker/test/white.xyz %%PORTDOCS%%share/tinker/test/white.xyz
%%PORTDOCS%%share/tinker/tinker.txt share/tinker/tinker.txt
%%PORTDOCS%%@dirrm share/doc/tinker %%PORTDOCS%%@dirrm share/doc/tinker
%%PORTDOCS%%@dirrm share/examples/tinker %%PORTDOCS%%@dirrm share/examples/tinker
%%PORTDOCS%%@dirrm share/tinker/bench %%PORTDOCS%%@dirrm share/tinker/bench
%%PORTDOCS%%@dirrm share/tinker/params @dirrm share/tinker/params
%%PORTDOCS%%@dirrm share/tinker/test %%PORTDOCS%%@dirrm share/tinker/test
%%PORTDOCS%%@dirrm share/tinker @dirrm share/tinker

70
biology/tinker/pkg-plist.viewer
View file

@ -14,6 +14,7 @@ bin/intxyz
bin/minimize bin/minimize
bin/minirot bin/minirot
bin/minrigid bin/minrigid
bin/monte
bin/newton bin/newton
bin/newtrot bin/newtrot
bin/nucleic bin/nucleic
@ -143,20 +144,19 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/bench/results-3.7 %%PORTDOCS%%share/tinker/bench/results-3.7
%%PORTDOCS%%share/tinker/bench/results-3.8 %%PORTDOCS%%share/tinker/bench/results-3.8
%%PORTDOCS%%share/tinker/bench/results-3.9 %%PORTDOCS%%share/tinker/bench/results-3.9
%%PORTDOCS%%share/tinker/params/README share/tinker/params/README
%%PORTDOCS%%share/tinker/params/amber.prm share/tinker/params/amber.prm
%%PORTDOCS%%share/tinker/params/charmm.prm share/tinker/params/charmm.prm
%%PORTDOCS%%share/tinker/params/dudek.prm share/tinker/params/hoch.prm
%%PORTDOCS%%share/tinker/params/hoch.prm share/tinker/params/mm2.prm
%%PORTDOCS%%share/tinker/params/mm2.prm share/tinker/params/mm3.prm
%%PORTDOCS%%share/tinker/params/mm3.prm share/tinker/params/mm3pro.prm
%%PORTDOCS%%share/tinker/params/mm3pro.prm share/tinker/params/opls.prm
%%PORTDOCS%%share/tinker/params/opls.prm share/tinker/params/oplsaa.prm
%%PORTDOCS%%share/tinker/params/oplsaa.prm share/tinker/params/smooth.prm
%%PORTDOCS%%share/tinker/params/smooth.prm share/tinker/params/smoothaa.prm
%%PORTDOCS%%share/tinker/params/smoothaa.prm share/tinker/params/water.prm
%%PORTDOCS%%share/tinker/params/water.prm share/tinker/rasmol/rasmol.hlp
%%PORTDOCS%%share/tinker/rasmol/rasmol.hlp
%%PORTDOCS%%share/tinker/test/README %%PORTDOCS%%share/tinker/test/README
%%PORTDOCS%%share/tinker/test/ala20.key %%PORTDOCS%%share/tinker/test/ala20.key
%%PORTDOCS%%share/tinker/test/ala20.xyz %%PORTDOCS%%share/tinker/test/ala20.xyz
@ -187,6 +187,9 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/bowl2.xyz %%PORTDOCS%%share/tinker/test/bowl2.xyz
%%PORTDOCS%%share/tinker/test/bowl3.key %%PORTDOCS%%share/tinker/test/bowl3.key
%%PORTDOCS%%share/tinker/test/bowl3.xyz %%PORTDOCS%%share/tinker/test/bowl3.xyz
%%PORTDOCS%%share/tinker/test/bucky.int
%%PORTDOCS%%share/tinker/test/bucky.key
%%PORTDOCS%%share/tinker/test/bucky.xyz
%%PORTDOCS%%share/tinker/test/butane.int %%PORTDOCS%%share/tinker/test/butane.int
%%PORTDOCS%%share/tinker/test/butane.key %%PORTDOCS%%share/tinker/test/butane.key
%%PORTDOCS%%share/tinker/test/butane.xyz %%PORTDOCS%%share/tinker/test/butane.xyz
@ -207,12 +210,12 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/c5.key %%PORTDOCS%%share/tinker/test/c5.key
%%PORTDOCS%%share/tinker/test/c5.seq %%PORTDOCS%%share/tinker/test/c5.seq
%%PORTDOCS%%share/tinker/test/c5.xyz %%PORTDOCS%%share/tinker/test/c5.xyz
%%PORTDOCS%%share/tinker/test/c7ax.key %%PORTDOCS%%share/tinker/test/c7a.key
%%PORTDOCS%%share/tinker/test/c7ax.seq %%PORTDOCS%%share/tinker/test/c7a.seq
%%PORTDOCS%%share/tinker/test/c7ax.xyz %%PORTDOCS%%share/tinker/test/c7a.xyz
%%PORTDOCS%%share/tinker/test/c7eq.key %%PORTDOCS%%share/tinker/test/c7e.key
%%PORTDOCS%%share/tinker/test/c7eq.seq %%PORTDOCS%%share/tinker/test/c7e.seq
%%PORTDOCS%%share/tinker/test/c7eq.xyz %%PORTDOCS%%share/tinker/test/c7e.xyz
%%PORTDOCS%%share/tinker/test/calmodulin.key %%PORTDOCS%%share/tinker/test/calmodulin.key
%%PORTDOCS%%share/tinker/test/calmodulin.pdb %%PORTDOCS%%share/tinker/test/calmodulin.pdb
%%PORTDOCS%%share/tinker/test/calmodulin.seq %%PORTDOCS%%share/tinker/test/calmodulin.seq
@ -250,6 +253,9 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/diene.xyz %%PORTDOCS%%share/tinker/test/diene.xyz
%%PORTDOCS%%share/tinker/test/dimethane.key %%PORTDOCS%%share/tinker/test/dimethane.key
%%PORTDOCS%%share/tinker/test/dimethane.xyz %%PORTDOCS%%share/tinker/test/dimethane.xyz
%%PORTDOCS%%share/tinker/test/diwater.key
%%PORTDOCS%%share/tinker/test/diwater.lin
%%PORTDOCS%%share/tinker/test/diwater.xyz
%%PORTDOCS%%share/tinker/test/enkephalin.int %%PORTDOCS%%share/tinker/test/enkephalin.int
%%PORTDOCS%%share/tinker/test/enkephalin.key %%PORTDOCS%%share/tinker/test/enkephalin.key
%%PORTDOCS%%share/tinker/test/enkephalin.make %%PORTDOCS%%share/tinker/test/enkephalin.make
@ -276,6 +282,7 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/form.xyz %%PORTDOCS%%share/tinker/test/form.xyz
%%PORTDOCS%%share/tinker/test/formbig.key %%PORTDOCS%%share/tinker/test/formbig.key
%%PORTDOCS%%share/tinker/test/formbig.xyz %%PORTDOCS%%share/tinker/test/formbig.xyz
%%PORTDOCS%%share/tinker/test/formbox.dyn
%%PORTDOCS%%share/tinker/test/formbox.key %%PORTDOCS%%share/tinker/test/formbox.key
%%PORTDOCS%%share/tinker/test/formbox.xyz %%PORTDOCS%%share/tinker/test/formbox.xyz
%%PORTDOCS%%share/tinker/test/furan.int %%PORTDOCS%%share/tinker/test/furan.int
@ -297,6 +304,7 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/hexanes.key %%PORTDOCS%%share/tinker/test/hexanes.key
%%PORTDOCS%%share/tinker/test/hexanes.run %%PORTDOCS%%share/tinker/test/hexanes.run
%%PORTDOCS%%share/tinker/test/hexanes.xyz %%PORTDOCS%%share/tinker/test/hexanes.xyz
%%PORTDOCS%%share/tinker/test/hexanex.xyz
%%PORTDOCS%%share/tinker/test/imidazole.int %%PORTDOCS%%share/tinker/test/imidazole.int
%%PORTDOCS%%share/tinker/test/imidazole.key %%PORTDOCS%%share/tinker/test/imidazole.key
%%PORTDOCS%%share/tinker/test/imidazole.xyz %%PORTDOCS%%share/tinker/test/imidazole.xyz
@ -305,10 +313,14 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/imine.xyz %%PORTDOCS%%share/tinker/test/imine.xyz
%%PORTDOCS%%share/tinker/test/lactam.key %%PORTDOCS%%share/tinker/test/lactam.key
%%PORTDOCS%%share/tinker/test/lactam.xyz %%PORTDOCS%%share/tinker/test/lactam.xyz
%%PORTDOCS%%share/tinker/test/lipid.key
%%PORTDOCS%%share/tinker/test/lipid.xyz
%%PORTDOCS%%share/tinker/test/melittin.key %%PORTDOCS%%share/tinker/test/melittin.key
%%PORTDOCS%%share/tinker/test/melittin.pdb %%PORTDOCS%%share/tinker/test/melittin.pdb
%%PORTDOCS%%share/tinker/test/melittin.seq %%PORTDOCS%%share/tinker/test/melittin.seq
%%PORTDOCS%%share/tinker/test/melittin.xyz %%PORTDOCS%%share/tinker/test/melittin.xyz
%%PORTDOCS%%share/tinker/test/membrane.key
%%PORTDOCS%%share/tinker/test/membrane.xyz
%%PORTDOCS%%share/tinker/test/methane.int %%PORTDOCS%%share/tinker/test/methane.int
%%PORTDOCS%%share/tinker/test/methane.key %%PORTDOCS%%share/tinker/test/methane.key
%%PORTDOCS%%share/tinker/test/methane.xyz %%PORTDOCS%%share/tinker/test/methane.xyz
@ -319,6 +331,9 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/naphthalene.int %%PORTDOCS%%share/tinker/test/naphthalene.int
%%PORTDOCS%%share/tinker/test/naphthalene.key %%PORTDOCS%%share/tinker/test/naphthalene.key
%%PORTDOCS%%share/tinker/test/naphthalene.xyz %%PORTDOCS%%share/tinker/test/naphthalene.xyz
%%PORTDOCS%%share/tinker/test/nitrogen.dyn
%%PORTDOCS%%share/tinker/test/nitrogen.key
%%PORTDOCS%%share/tinker/test/nitrogen.xyz
%%PORTDOCS%%share/tinker/test/nma.int %%PORTDOCS%%share/tinker/test/nma.int
%%PORTDOCS%%share/tinker/test/nma.key %%PORTDOCS%%share/tinker/test/nma.key
%%PORTDOCS%%share/tinker/test/nma.xyz %%PORTDOCS%%share/tinker/test/nma.xyz
@ -347,6 +362,8 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/peptide.xyz %%PORTDOCS%%share/tinker/test/peptide.xyz
%%PORTDOCS%%share/tinker/test/phenanth.key %%PORTDOCS%%share/tinker/test/phenanth.key
%%PORTDOCS%%share/tinker/test/phenanth.xyz %%PORTDOCS%%share/tinker/test/phenanth.xyz
%%PORTDOCS%%share/tinker/test/pol3.key
%%PORTDOCS%%share/tinker/test/pol3.xyz
%%PORTDOCS%%share/tinker/test/propane.key %%PORTDOCS%%share/tinker/test/propane.key
%%PORTDOCS%%share/tinker/test/propane.ray %%PORTDOCS%%share/tinker/test/propane.ray
%%PORTDOCS%%share/tinker/test/propane.xyz %%PORTDOCS%%share/tinker/test/propane.xyz
@ -363,6 +380,8 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/pyrrole.xyz %%PORTDOCS%%share/tinker/test/pyrrole.xyz
%%PORTDOCS%%share/tinker/test/retinoic.key %%PORTDOCS%%share/tinker/test/retinoic.key
%%PORTDOCS%%share/tinker/test/retinoic.xyz %%PORTDOCS%%share/tinker/test/retinoic.xyz
%%PORTDOCS%%share/tinker/test/skunk.key
%%PORTDOCS%%share/tinker/test/skunk.xyz
%%PORTDOCS%%share/tinker/test/sterol.key %%PORTDOCS%%share/tinker/test/sterol.key
%%PORTDOCS%%share/tinker/test/sterol.xyz %%PORTDOCS%%share/tinker/test/sterol.xyz
%%PORTDOCS%%share/tinker/test/styrene.int %%PORTDOCS%%share/tinker/test/styrene.int
@ -399,14 +418,17 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/watersmall.dyn %%PORTDOCS%%share/tinker/test/watersmall.dyn
%%PORTDOCS%%share/tinker/test/watersmall.key %%PORTDOCS%%share/tinker/test/watersmall.key
%%PORTDOCS%%share/tinker/test/watersmall.xyz %%PORTDOCS%%share/tinker/test/watersmall.xyz
%%PORTDOCS%%share/tinker/test/watertiny.dyn
%%PORTDOCS%%share/tinker/test/watertiny.key
%%PORTDOCS%%share/tinker/test/watertiny.xyz
%%PORTDOCS%%share/tinker/test/white.int %%PORTDOCS%%share/tinker/test/white.int
%%PORTDOCS%%share/tinker/test/white.key %%PORTDOCS%%share/tinker/test/white.key
%%PORTDOCS%%share/tinker/test/white.xyz %%PORTDOCS%%share/tinker/test/white.xyz
%%PORTDOCS%%share/tinker/tinker.txt share/tinker/tinker.txt
%%PORTDOCS%%@dirrm share/doc/tinker %%PORTDOCS%%@dirrm share/doc/tinker
%%PORTDOCS%%@dirrm share/examples/tinker %%PORTDOCS%%@dirrm share/examples/tinker
%%PORTDOCS%%@dirrm share/tinker/bench %%PORTDOCS%%@dirrm share/tinker/bench
%%PORTDOCS%%@dirrm share/tinker/params @dirrm share/tinker/params
%%PORTDOCS%%@dirrm share/tinker/rasmol @dirrm share/tinker/rasmol
%%PORTDOCS%%@dirrm share/tinker/test %%PORTDOCS%%@dirrm share/tinker/test
%%PORTDOCS%%@dirrm share/tinker @dirrm share/tinker