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math/py-dionysus: FIx build failure with clang-18; Add tests

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Reported by:	fallout
This commit is contained in:
Yuri Victorovich 2024-04-11 20:39:48 -07:00
parent 883d41c20f
commit e51da618ba
2 changed files with 18 additions and 1 deletions
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6
math/py-dionysus/Makefile
View file

@ -14,11 +14,15 @@ LICENSE_FILE= ${WRKSRC}/LICENSE.txt
BUILD_DEPENDS= ${LOCALBASE}/include/boost/range/adaptors.hpp:devel/boost-libs BUILD_DEPENDS= ${LOCALBASE}/include/boost/range/adaptors.hpp:devel/boost-libs
USES= cmake python USES= cmake compiler:c++14-lang python
USE_PYTHON= flavors pytest # 1 test fails, see https://github.com/mrzv/dionysus/issues/64, another one loops forever
CMAKE_ARGS= -DPython_EXECUTABLE:STRING=${PYTHON_CMD} CMAKE_ARGS= -DPython_EXECUTABLE:STRING=${PYTHON_CMD}
CMAKE_OFF= build_examples CMAKE_OFF= build_examples
TEST_WRKSRC= ${WRKSRC}/tests
TEST_ENV= ${MAKE_ENV} PYTHONPATH=${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}
PLIST_FILES= ${PYTHON_SITELIBDIR}/dionysus/__init__.py \ PLIST_FILES= ${PYTHON_SITELIBDIR}/dionysus/__init__.py \
${PYTHON_SITELIBDIR}/dionysus/_dionysus${PYTHON_EXT_SUFFIX}.so \ ${PYTHON_SITELIBDIR}/dionysus/_dionysus${PYTHON_EXT_SUFFIX}.so \
${PYTHON_SITELIBDIR}/dionysus/_version.py \ ${PYTHON_SITELIBDIR}/dionysus/_version.py \

13
math/py-dionysus/files/patch-bindings_python_boundary.cpp Normal file
View file

@ -0,0 +1,13 @@
- workaround for https://github.com/mrzv/dionysus/issues/63
--- bindings/python/boundary.cpp.orig 2024-04-12 03:21:33 UTC
+++ bindings/python/boundary.cpp
@@ -68,7 +68,7 @@ PyMatrixFiltration coboundary(const PyFiltration& f)
return Entry(ee, f.index(e.index()));
}))
{
- m.column(n - 1 - x.index()).emplace_back(Entry { x.element(), n - 1 - i });
+ m.column(n - 1 - x.index()).emplace_back(Entry { x.element(), (unsigned int)(n - 1 - i) });
}
++i;
}