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Update to version 0.4

Browse source 
PR: 23210
Submitted by: MAINTAINER
This commit is contained in:
Kevin Lo 2000-12-01 17:06:54 +00:00
parent 09824ccb3c
commit e3f7b9190b
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=35586
4 changed files with 30 additions and 25 deletions
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18
textproc/py-martel/Makefile
View file

@ -6,32 +6,34 @@
#
PORTNAME= martel
PORTVERSION= 0.3.5
PORTVERSION= 0.4
PORTEPOCH= 1
CATEGORIES= textproc biology python
MASTER_SITES= http://www.biopython.org/~dalke/Martel/
PKGNAMEPREFIX= py-
DISTNAME= Martel-0.35
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
DISTNAME= Martel-0.4
MAINTAINER= johann@egenetics.com
RUN_DEPENDS= ${PYTHON_SITELIBDIR}/TextTools/__init__.py:${PORTSDIR}/textproc/py-mxTextTools
PYTHON_VERSION= python2.0
NO_BUILD= yes
MARTEL_DIR= ${PYTHON_SITELIBDIR}/Martel
MARTEL_EXAMPLEDIR=${PREFIX}/share/examples/martel
MARTEL_DOCDIR= ${PREFIX}/share/doc/martel
do-build:
@ ${PYTHON_CMD} ${PYTHON_LIBDIR}/compileall.py ${WRKSRC}
@ ${PYTHON_CMD} -O ${PYTHON_LIBDIR}/compileall.py ${WRKSRC}
do-install:
@ ${MKDIR} ${MARTEL_DIR}
@ (cd ${WRKSRC} && find *.py examples formats test \
@ (cd ${WRKSRC} && find *.py *.pyc *.pyo formats test \
| cpio --quiet -pdum -R ${BINOWN}:${BINGRP} ${MARTEL_DIR})
@ ${PYTHON_CMD} ${PYTHON_LIBDIR}/compileall.py ${MARTEL_DIR}
@ ${PYTHON_CMD} -O ${PYTHON_LIBDIR}/compileall.py ${MARTEL_DIR}
@ ${MKDIR} ${MARTEL_EXAMPLEDIR}
@ ${MKDIR} ${MARTEL_EXAMPLEDIR}/builders
@ ${INSTALL_DATA} ${WRKSRC}/examples/* ${MARTEL_EXAMPLEDIR}
@ ${INSTALL_DATA} ${WRKSRC}/builders/* ${MARTEL_EXAMPLEDIR}/builders
post-install:
.if !defined(NOPORTDOCS)

2
textproc/py-martel/distinfo
View file

@ -1 +1 @@
MD5 (Martel-0.35.tar.gz) = 8743c59c37132ecfe6a99c91f774409e
MD5 (Martel-0.4.tar.gz) = 3f54a121b70b69f6167dd61343c73cc0

13
textproc/py-martel/pkg-descr
View file

@ -1,10 +1,13 @@
Martel is a parser generator, written in Python, which takes a regular
expression grammer for a format and turns the resultant parsed tree into a
set of callback events emulating the XML/SAX API.
expression grammer for a file format and turns the resultant parsed tree into
a set of callback events emulating the XML/SAX API.
It was originally intended for use in biocomputing applications (such as
Biopython - http://www.biopython.org/), where there is often a need to parse
existing flat and semi-structured file formats. However, it is generally
Essentially this means that existing and readily available XML tools can be
used to parse non-XML flat file formats.
Martel was originally intended for use in biocomputing applications (such as
Biopython - http://www.biopython.org/) where there is often a need to parse
flat and semi-structured legacy file formats. However, it is generally
applicable to the parsing of such files in all fields of endeavour.
More information on Martel may be found in this conference poster:

22
textproc/py-martel/pkg-plist
View file

@ -19,16 +19,6 @@ lib/%%PYTHON_VERSION%%/site-packages/Martel/__init__.pyo
lib/%%PYTHON_VERSION%%/site-packages/Martel/convert_re.py
lib/%%PYTHON_VERSION%%/site-packages/Martel/convert_re.pyc
lib/%%PYTHON_VERSION%%/site-packages/Martel/convert_re.pyo
lib/%%PYTHON_VERSION%%/site-packages/Martel/examples/README
lib/%%PYTHON_VERSION%%/site-packages/Martel/examples/pdb1plm.ent
lib/%%PYTHON_VERSION%%/site-packages/Martel/examples/sample.swissprot
lib/%%PYTHON_VERSION%%/site-packages/Martel/examples/swissprot2html.py
lib/%%PYTHON_VERSION%%/site-packages/Martel/examples/swissprot2html.pyc
lib/%%PYTHON_VERSION%%/site-packages/Martel/examples/swissprot2html.pyo
lib/%%PYTHON_VERSION%%/site-packages/Martel/examples/test.mol
lib/%%PYTHON_VERSION%%/site-packages/Martel/examples/toxml.py
lib/%%PYTHON_VERSION%%/site-packages/Martel/examples/toxml.pyc
lib/%%PYTHON_VERSION%%/site-packages/Martel/examples/toxml.pyo
lib/%%PYTHON_VERSION%%/site-packages/Martel/formats/MDL_10_1996.py
lib/%%PYTHON_VERSION%%/site-packages/Martel/formats/MDL_10_1996.pyc
lib/%%PYTHON_VERSION%%/site-packages/Martel/formats/MDL_10_1996.pyo
@ -92,6 +82,9 @@ lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_Parser.pyo
lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_RecordReader.py
lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_RecordReader.pyc
lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_RecordReader.pyo
lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_RecordReader2.py
lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_RecordReader2.pyc
lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_RecordReader2.pyo
lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_blastall_2_0_10.py
lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_blastall_2_0_10.pyc
lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_blastall_2_0_10.pyo
@ -108,14 +101,21 @@ lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_swissprot38.py
lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_swissprot38.pyc
lib/%%PYTHON_VERSION%%/site-packages/Martel/test/test_swissprot38.pyo
share/examples/martel/README
share/examples/martel/builders/SwissProtBuilder.py
share/examples/martel/builders/SwissProtBuilder.pyc
share/examples/martel/builders/SwissProtBuilder.pyo
share/examples/martel/pdb1plm.ent
share/examples/martel/sample.swissprot
share/examples/martel/swissprot2html.py
share/examples/martel/swissprot2html.pyc
share/examples/martel/swissprot2html.pyo
share/examples/martel/test.mol
share/examples/martel/toxml.py
share/examples/martel/toxml.pyc
share/examples/martel/toxml.pyo
@dirrm share/examples/martel/builders
@dirrm share/examples/martel
@dirrm lib/%%PYTHON_VERSION%%/site-packages/Martel/test
@dirrm lib/%%PYTHON_VERSION%%/site-packages/Martel/formats
@dirrm lib/%%PYTHON_VERSION%%/site-packages/Martel/examples
@dirrm lib/%%PYTHON_VERSION%%/site-packages/Martel
@unexec rm -rf %D/share/doc/martel 2>/dev/null || true