Add new port superlu_mt

PR:		52033
Submitted by:	Pedro F. Giffuni <giffunip@yahoo.com>

math/Makefile

@@ -167,6 +167,7 @@
     SUBDIR += spooles-mpich
     SUBDIR += ss
     SUBDIR += superlu
+    SUBDIR += superlu_mt
     SUBDIR += surf
     SUBDIR += thx_1138
     SUBDIR += topaz

math/superlu_mt/Makefile

@@ -0,0 +1,48 @@
+# New ports collection makefile for:	SuperLU_MT
+# Date created:		31 Apr 2003
+# Whom:			Pedro Giffuni <giffunip@asme.org>
+#
+# $FreeBSD$
+#
+
+PORTNAME=	superlu_mt
+PORTVERSION=	1.0
+CATEGORIES=	math
+MASTER_SITES=	http://crd.lbl.gov/~xiaoye/SuperLU/ \
+		http://crd.lbl.gov/~xiaoye/
+DISTNAME=	${PORTNAME}_${PORTVERSION}
+.ifndef NOPORTDOCS
+DISTFILES=	${DISTNAME}${EXTRACT_SUFX} simax97.ps.gz
+.endif
+DIST_SUBDIR=	superlu
+EXTRACT_ONLY=	${DISTNAME}${EXTRACT_SUFX}
+
+MAINTAINER=	ports@FreeBSD.org
+COMMENT=	Routines for performing multithreaded sparse factorization
+
+BUILD_DEPENDS=	${LOCALBASE}/lib/libblas.a:${PORTSDIR}/math/blas
+
+USE_REINPLACE=	yes
+WRKSRC=		${WRKDIR}/SuperLU_MT
+ALL_TARGET=	superlulib
+
+BLAS_LIBS=	${LOCALBASE}/lib/libblas.a
+
+post-patch:
+	@${REINPLACE_CMD} -e 's+%%BLAS_LIBS%%+${BLAS_LIBS}+ ; \
+	  s+%%PTHREAD_CFLAGS%%+${PTHREAD_CFLAGS}+ ; \
+	  s+%%PTHREAD_LIBS%%+${PTHREAD_LIBS}+ ' \
+		${WRKSRC}/make.inc
+
+do-install:
+	${INSTALL_DATA} ${WRKSRC}/libsuperlu_mt.* ${PREFIX}/lib
+	${MKDIR} ${PREFIX}/include/${PORTNAME}
+	${INSTALL_DATA} ${WRKSRC}/SRC/*.h ${PREFIX}/include/${PORTNAME}
+.ifndef NOPORTDOCS
+	@${MKDIR} ${DOCSDIR}
+	${INSTALL_DATA} ${WRKSRC}/INSTALL/*.ps ${DOCSDIR}
+	${GZIP_CMD} ${DOCSDIR}/*.ps
+	${INSTALL_DATA} ${DISTDIR}/${DIST_SUBDIR}/simax97.ps.gz ${DOCSDIR}
+.endif
+
+.include <bsd.port.mk>

math/superlu_mt/distinfo

@@ -0,0 +1,2 @@
+MD5 (superlu/superlu_mt_1.0.tar.gz) = c7b9dad115eed03dc7200d1a5d227293
+MD5 (superlu/simax97.ps.gz) = 728451cbf49c2961249da054e90b6ecd

math/superlu_mt/files/patch-SRC+pdmemory.c

@@ -0,0 +1,11 @@
+--- SRC/pdmemory.c.orig	Thu May  8 22:40:59 2003
++++ SRC/pdmemory.c	Thu May  8 22:41:20 2003
+@@ -6,7 +6,7 @@
+  *
+  */
+ #include <stdio.h>
+-#include <malloc.h>
++#include <stdlib.h>
+ #include "pdsp_defs.h"
+ 
+ /* ------------------

math/superlu_mt/files/patch-SRC+pmemory.c

@@ -0,0 +1,10 @@
+--- SRC/pmemory.c.orig	Thu May  8 22:45:07 2003
++++ SRC/pmemory.c	Thu May  8 22:45:27 2003
+@@ -7,7 +7,6 @@
+  */
+ #include <stdlib.h>
+ #include <stdio.h>
+-#include <malloc.h>
+ #include "pdsp_defs.h"
+ 
+ #define XPAND_HINT(memtype, new_next, jcol, param) {\

math/superlu_mt/files/patch-SRC+qrnzcnt.c

@@ -0,0 +1,8 @@
+--- SRC/qrnzcnt.c.orig	Thu May  8 22:47:27 2003
++++ SRC/qrnzcnt.c	Thu May  8 22:47:47 2003
+@@ -1,4 +1,4 @@
+-#include <malloc.h>
++#include <stdlib.h>
+ #include "pdsp_defs.h"
+ 
+ #define EMPTY    (-1)

math/superlu_mt/files/patch-SRC+sp_coletree.c

@@ -0,0 +1,14 @@
+*** SRC/sp_coletree.c.orig	Fri Aug  6 05:31:22 1999
+--- SRC/sp_coletree.c	Thu Dec 16 03:29:12 1999
+***************
+*** 2,8 ****
+--- 2,10 ----
+  /*  Elimination tree computation and layout routines */
+  
+  #include <stdio.h>
++ #ifndef __STDC__
+  #include <malloc.h>
++ #endif
+  #include <stdlib.h>
+  #include "util.h"
+  

math/superlu_mt/files/patch-SRC+util.h

@@ -0,0 +1,10 @@
+--- SRC/util.h.orig	Wed Sep  1 19:13:00 1999
++++ SRC/util.h	Thu May  8 22:31:53 2003
+@@ -12,7 +12,6 @@
+ #include <stdio.h>
+ #include <stdlib.h>
+ #include <string.h>
+-#include <malloc.h>
+ 
+ /* Macros */
+ #ifndef USER_ABORT

math/superlu_mt/files/patch-make.inc

@@ -0,0 +1,46 @@
+--- make.inc.orig	Thu Sep  2 15:47:13 1999
++++ make.inc	Tue May 27 19:32:12 2003
+@@ -14,14 +14,15 @@
+ #
+ #  The machine (platform) identifier to append to the library names
+ #
+-PLAT = _SOLARIS
++PLAT = _PTHREAD
+ 
+ # Common Libraries
+-TMGLIB       	= tmglib$(PLAT).a
+-SUPERLULIB   	= superlu_mt$(PLAT).a
+-BLASLIB     	= ../blas$(PLAT).a
++TMGLIB       	= libtmg.a
++SUPERLULIB   	= libsuperlu_mt.a
++BLASDEF		= -DUSE_VENDOR_BLAS
++BLASLIB     	= %%BLAS_LIBS%%
+ MATHLIB	     	= -lm 
+-MPLIB		= -lthread
++MPLIB		= %%PTHREAD_LIBS%%
+ 
+ #
+ #  The archiver and the flag(s) to use when building archive (library)
+@@ -32,18 +33,18 @@
+ RANLIB       	= ranlib
+ 
+ # for Solaris 2.x
+-CC	     	= cc
++CC	     	?= cc
+ #
+ # Definitions used by CPP:
+ PREDEFS      	= -D$(PLAT)
+ #
+-CFLAGS       	= $(PREDEFS) -xO3 -xcg92 $(DBG)
++CFLAGS       	+= $(PREDEFS) %%PTHREAD_CFLAGS%%
+ NOOPTS	     	=
+ BLASOPTS	=
+ LOADER       	= cc
+ LOADOPTS     	= -O
+-FORTRAN		= f77
+-FFLAGS		= -O
++FORTRAN		?= f77
++FFLAGS		?= -O
+ 
+ #
+ #  C preprocessor defs for compilation (-DNoChange, -DAdd_, or -DUpCase)

math/superlu_mt/pkg-descr

@@ -0,0 +1,23 @@
+			SuperLU_MT (version 1.0)
+			========================
+
+SuperLU_MT contains a set of subroutines to solve a sparse linear system 
+A*X=B. It uses Gaussian elimination with partial pivoting (GEPP). 
+The columns of A may be preordered before factorization; the 
+preordering for sparsity is completely separate from the factorization.
+
+SuperLU_MT is a parallel extension to the serial SuperLU library.
+SuperLU_MT is implemented in ANSI C, with multithreading extension,
+for example, using POSIX threads. Currently, only the LU factorization 
+routine, which is the most time-consuming part of the solution process, 
+is parallelized on machines with a shared address space. The other
+routines, such as column preordering and the forward and back substitutions
+are performed sequentially. This "alpha" release contains only 
+double-precision real data type.
+
+WWW: http://www.nersc.gov/~xiaoye/SuperLU/
+____
+Xiaoye S. Li,    Lawrence Berkeley National Lab, xiaoye@nersc.gov
+James Demmel,    Univ. of California Berkeley, demmel@cs.berkeley.edu
+John R. Gilbert, Xerox Palo Alto Research Center, gilbert@parc.xerox.com
+NOTE: This library has to be linked with BLAS or a thread safe replacement.

math/superlu_mt/pkg-plist

@@ -0,0 +1,12 @@
+include/superlu_mt/Cnames.h
+include/superlu_mt/colamd.h
+include/superlu_mt/machines.h
+include/superlu_mt/pdsp_defs.h
+include/superlu_mt/pxgstrf_synch.h
+include/superlu_mt/supermatrix.h
+include/superlu_mt/util.h
+lib/libsuperlu_mt.a
+@dirrm include/superlu_mt
+%%PORTDOCS%%share/doc/superlu_mt/simax97.ps.gz
+%%PORTDOCS%%share/doc/superlu_mt/ug.ps.gz
+%%PORTDOCS%%@dirrm share/doc/superlu_mt