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Upgrade to 2.1.1

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PR:		ports/10228
Submitted by:	Michael Haro mharo@area51.fremont.ca.us
This commit is contained in:
Bill Fenner 1999-03-08 20:23:47 +00:00
parent db0d549c50
commit b0f9653aea
Notes: svn2git 2021-03-31 03:12:20 +00:00 
svn path=/head/; revision=17072
3 changed files with 16 additions and 8 deletions
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16
biology/hmmer/Makefile
View file

@ -3,27 +3,29 @@
# Date created: June 29 1998 # Date created: June 29 1998
# Whom: barnhart@genetics.wustl.edu # Whom: barnhart@genetics.wustl.edu
# #
# $Id: Makefile,v 1.2 1998/12/09 22:35:04 billf Exp $ # $Id: Makefile,v 1.3 1999/01/02 00:12:17 asami Exp $
# #
DISTNAME= hmmer-2.0 DISTNAME= hmmer-2.1.1
CATEGORIES= biology CATEGORIES= biology
MASTER_SITES= ftp://ftp.genetics.wustl.edu/pub/eddy/hmmer/oldversions/2.0/ MASTER_SITES= ftp://ftp.genetics.wustl.edu/pub/eddy/hmmer/
EXTRACT_SUFX= .tar.Z EXTRACT_SUFX= .tar.Z
MAINTAINER= barnhart@genetics.wustl.edu MAINTAINER= barnhart@genetics.wustl.edu
USE_PERL5= yes GNU_CONFIGURE= yes
MAN1= hmmalign.1 hmmbuild.1 hmmcalibrate.1 hmmconvert.1 hmmemit.1 hmmer.1 hmmpfam.1 hmmsearch.1
WRKSRC= ${WRKDIR}/build/${DISTNAME} USE_PERL5= yes
MAN1= hmmalign.1 hmmbuild.1 hmmcalibrate.1 hmmconvert.1 hmmemit.1 \
hmmer.1 hmmpfam.1 hmmsearch.1 hmmfetch.1 hmmindex.1 alistat.1 \
getseq.1 seqstat.1 sreformat.1
post-build: post-build:
@ strip ${WRKSRC}/binaries/* @ strip ${WRKSRC}/binaries/*
@ make test @ make test
test: test:
@(cd ${WRKSRC}; make test) @(cd ${WRKSRC}; make check)
post-install: post-install:
.if !defined(NOPORTDOCS) .if !defined(NOPORTDOCS)

2
biology/hmmer/distinfo
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@ -1 +1 @@
MD5 (hmmer-2.0.tar.Z) = 7e993a3883046840f0672ea004bc268b MD5 (hmmer-2.1.1.tar.Z) = 0f98910a3507b4d52fbe82adc6fa89b5

6
biology/hmmer/pkg-plist
View file

@ -1,9 +1,15 @@
bin/alistat
bin/getseq
bin/hmmalign bin/hmmalign
bin/hmmbuild bin/hmmbuild
bin/hmmcalibrate bin/hmmcalibrate
bin/hmmconvert bin/hmmconvert
bin/hmmemit bin/hmmemit
bin/hmmfetch
bin/hmmindex
bin/hmmpfam bin/hmmpfam
bin/hmmsearch bin/hmmsearch
bin/seqstat
bin/sreformat
share/doc/hmmer/Userguide.ps share/doc/hmmer/Userguide.ps
@dirrm share/doc/hmmer @dirrm share/doc/hmmer