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biology/hmmer: update to 3.4

Browse source 
Now builds and runs on armv7/aarch64!

Changelog: http://cryptogenomicon.org/hmmer-3-4-release.html

See also file RELEASE-3.4.md in distfile for an extended change log.

Approved by:	mzaki@e-mail.ne.jp (maintainer timeout, two weeks)
PR:		282111
This commit is contained in:
Robert Clausecker 2024-10-15 17:05:24 +02:00
parent 9ecc74ab46
commit 8647447c0d
3 changed files with 6 additions and 8 deletions
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7
biology/hmmer/Makefile
View file

@ -1,6 +1,5 @@
PORTNAME= hmmer PORTNAME= hmmer
PORTVERSION= 3.3.2 DISTVERSION= 3.4
PORTREVISION= 1
CATEGORIES= biology CATEGORIES= biology
MASTER_SITES= http://eddylab.org/software/hmmer/ MASTER_SITES= http://eddylab.org/software/hmmer/
@ -11,8 +10,8 @@ WWW= http://hmmer.org/
LICENSE= BSD3CLAUSE LICENSE= BSD3CLAUSE
LICENSE_FILE= ${WRKSRC}/LICENSE LICENSE_FILE= ${WRKSRC}/LICENSE
ONLY_FOR_ARCHS= amd64 i386 powerpc powerpc64 ONLY_FOR_ARCHS= aarch64 amd64 armv7 i386 powerpc powerpc64
ONLY_FOR_ARCHS_REASON= requires SSE2 or AltiVec instructions ONLY_FOR_ARCHS_REASON= requires NEON, SSE2 or AltiVec instructions
USES= compiler:c11 gmake perl5 python:test shebangfix USES= compiler:c11 gmake perl5 python:test shebangfix
USE_PERL5= test USE_PERL5= test

6
biology/hmmer/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1665491511 TIMESTAMP = 1729004147
SHA256 (hmmer-3.3.2.tar.gz) = 92fee9b5efe37a5276352d3502775e7c46e9f7a0ee45a331eacb2a0cac713c69 SHA256 (hmmer-3.4.tar.gz) = ca70d94fd0cf271bd7063423aabb116d42de533117343a9b27a65c17ff06fbf3
SIZE (hmmer-3.3.2.tar.gz) = 18213049 SIZE (hmmer-3.4.tar.gz) = 19669667

1
biology/hmmer/pkg-plist
View file

@ -20,7 +20,6 @@ bin/phmmer
share/man/man1/alimask.1.gz share/man/man1/alimask.1.gz
share/man/man1/hmmalign.1.gz share/man/man1/hmmalign.1.gz
share/man/man1/hmmbuild.1.gz share/man/man1/hmmbuild.1.gz
share/man/man1/hmmc2.1.gz
share/man/man1/hmmconvert.1.gz share/man/man1/hmmconvert.1.gz
share/man/man1/hmmemit.1.gz share/man/man1/hmmemit.1.gz
share/man/man1/hmmer.1.gz share/man/man1/hmmer.1.gz