mirror of
https://git.freebsd.org/ports.git
synced 2025-06-01 19:06:28 -04:00
math/stanmath: New port: C++ template library for automatic differentiation
This commit is contained in:
parent
50ae877785
commit
5f8880a8d7
7 changed files with 1839 additions and 0 deletions
|
@ -987,6 +987,7 @@
|
|||
SUBDIR += spooles-mpich
|
||||
SUBDIR += spot
|
||||
SUBDIR += sprng
|
||||
SUBDIR += stanmath
|
||||
SUBDIR += stp
|
||||
SUBDIR += suitesparse
|
||||
SUBDIR += suitesparse-amd
|
||||
|
|
35
math/stanmath/Makefile
Normal file
35
math/stanmath/Makefile
Normal file
|
@ -0,0 +1,35 @@
|
|||
PORTNAME= stanmath
|
||||
DISTVERSIONPREFIX= v
|
||||
DISTVERSION= 4.1.0
|
||||
CATEGORIES= math
|
||||
|
||||
MAINTAINER= yuri@FreeBSD.org
|
||||
COMMENT= C++ template library for automatic differentiation
|
||||
|
||||
LICENSE= BSD3CLAUSE
|
||||
LICENSE_FILE= ${WRKSRC}/LICENSE.md
|
||||
|
||||
RUN_DEPENDS= ${LOCALBASE}/include/boost/math/constants/constants.hpp:devel/boost-libs \
|
||||
${LOCALBASE}/include/tbb/task_arena.h:devel/onetbb # compiler define -DTBB_INTERFACE_NEW chooses oneTBB as opposed to TBB
|
||||
TEST_DEPENDS= gmake:devel/gmake
|
||||
|
||||
USES= eigen:3,run, python:test shebangfix
|
||||
|
||||
USE_GITHUB= yes
|
||||
GH_ACCOUNT= stan-dev
|
||||
GH_PROJECT= math
|
||||
|
||||
SHEBANG_FILES= runTests.py
|
||||
|
||||
MAKE_ENV= TBB_LIB="${LOCALBASE}/lib"
|
||||
|
||||
NO_BUILD= yes
|
||||
NO_ARCH= yes
|
||||
|
||||
do-install:
|
||||
@cd ${WRKSRC} && ${COPYTREE_SHARE} stan ${STAGEDIR}${PREFIX}/include
|
||||
|
||||
do-test: # fail to compile: https://github.com/stan-dev/math/issues/2571
|
||||
@cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} ./runTests.py test/unit test/prob
|
||||
|
||||
.include <bsd.port.mk>
|
3
math/stanmath/distinfo
Normal file
3
math/stanmath/distinfo
Normal file
|
@ -0,0 +1,3 @@
|
|||
TIMESTAMP = 1630043342
|
||||
SHA256 (stan-dev-math-v4.1.0_GH0.tar.gz) = f526be5f24864f256409ae5e4a17a5858e762a23c329d615a0709cd3935197ba
|
||||
SIZE (stan-dev-math-v4.1.0_GH0.tar.gz) = 28210482
|
14
math/stanmath/files/patch-make_compiler__flags
Normal file
14
math/stanmath/files/patch-make_compiler__flags
Normal file
|
@ -0,0 +1,14 @@
|
|||
--- make/compiler_flags.orig 2021-08-28 03:13:59 UTC
|
||||
+++ make/compiler_flags
|
||||
@@ -274,9 +274,9 @@ LDLIBS_TBB ?= $(LDFLAGS_TBB)
|
||||
|
||||
endif
|
||||
|
||||
-ifdef TBB_INTERFACE_NEW
|
||||
+#ifdef TBB_INTERFACE_NEW
|
||||
CPPFLAGS_TBB ?= -DTBB_INTERFACE_NEW
|
||||
-endif
|
||||
+#endif
|
||||
|
||||
################################################################################
|
||||
# Setup STAN_THREADS
|
11
math/stanmath/files/patch-runTests.py
Normal file
11
math/stanmath/files/patch-runTests.py
Normal file
|
@ -0,0 +1,11 @@
|
|||
--- runTests.py.orig 2021-08-28 03:33:35 UTC
|
||||
+++ runTests.py
|
||||
@@ -172,7 +172,7 @@ def generateTests(j):
|
||||
if isWin():
|
||||
doCommand("mingw32-make -j%d generate-tests -s" % (j or 1))
|
||||
else:
|
||||
- doCommand("make -j%d generate-tests -s" % (j or 1))
|
||||
+ doCommand("gmake -j%d generate-tests -s" % (j or 1))
|
||||
|
||||
|
||||
def divide_chunks(l, n):
|
6
math/stanmath/pkg-descr
Normal file
6
math/stanmath/pkg-descr
Normal file
|
@ -0,0 +1,6 @@
|
|||
The Stan Math Library is a C++, reverse-mode automatic differentiation library
|
||||
designed to be usable, extensive and extensible, efficient, scalable, stable,
|
||||
portable, and redistributable in order to facilitate the construction and
|
||||
utilization of algorithms that utilize derivatives.
|
||||
|
||||
WWW: https://mc-stan.org/math/
|
1769
math/stanmath/pkg-plist
Normal file
1769
math/stanmath/pkg-plist
Normal file
File diff suppressed because it is too large
Load diff
Loading…
Add table
Reference in a new issue