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net/openmpi: upgrade to v5.0.1
Release notes available at <https://www-lb.open-mpi.org/software/ompi/major-changes.php>. Notes: - The MPI C++ bindings were deprecated in the MPI-2.2 standard in 2009, and removed from the MPI-3.0 standard in 2012. The MPI C++ bindings were then removed from Open MPI v5.0.0 in 2022; - ofi (libfabric) was explicitly disabled in this port - I don’t know why but kept it this way; - ROMIO has been disabled (See <https://github.com/open-mpi/ompi/issues/9715>); - 32 bits platforms are not supported: this port has been repocopied to net/openmpi4 for them.
This commit is contained in:
Thierry Thomas
parent
3e61f8fcd4
commit
0728e016e0
5 changed files with 2513 additions and 475 deletions
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@ -1,8 +1,7 @@
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PORTNAME= openmpi
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PORTVERSION= 4.1.5
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PORTREVISION= 4
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PORTVERSION= 5.0.1
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CATEGORIES= net parallel
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MASTER_SITES= http://www.open-mpi.org/software/ompi/v${PORTVERSION:R}/downloads/
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MASTER_SITES= https://download.open-mpi.org/release/open-mpi/v${PORTVERSION:R}/
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MAINTAINER= ports@FreeBSD.org
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COMMENT= High Performance Message Passing Library
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@ -11,50 +10,52 @@ WWW= https://www.open-mpi.org/
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LICENSE= BSD3CLAUSE
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LICENSE_FILE= ${WRKSRC}/LICENSE
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NOT_FOR_ARCHS= armv6 armv7 i386 powerpc
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NOT_FOR_ARCHS_REASON= Not supported on 32-bits - see net/openmpi4
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LIB_DEPENDS= libhwloc.so.15:devel/hwloc2 \
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libltdl.so:devel/libltdl \
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libevent.so:devel/libevent \
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libmunge.so:security/munge
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libmunge.so:security/munge \
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libze_loader.so:devel/level-zero
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# :keepla because port uses lt_dlopen
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USES= fortran gmake libtool:keepla localbase perl5 \
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USES= compiler:c11 fortran gmake libtool:keepla localbase perl5 \
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pkgconfig shebangfix tar:bzip2
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HAS_CONFIGURE= yes
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CONFLICTS_INSTALL= openmpi4-4*
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USE_PERL5= build
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MPIBASE?= mpi
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MPIDIR?= ${MPIBASE}/${PKGBASE}
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PLIST_SUB+= MPIBASE=${MPIBASE}
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PLIST_SUB+= MPIDIR=${MPIDIR}
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# Workaround for https://github.com/open-mpi/ompi/issues/7516
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CONFIGURE_ENV+= DISABLE_gds_ds12=1 DISABLE_gds_ds21=1
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CONFIGURE_ARGS+= --prefix=${PREFIX}/${MPIDIR} \
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--mandir=${PREFIX}/${MPIDIR}/share/man \
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--program-prefix= \
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GNU_CONFIGURE= yes
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GNU_CONFIGURE_PREFIX= ${PREFIX}/${MPIDIR}
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GNU_CONFIGURE_MANPREFIX=${PREFIX}/${MPIDIR}/share
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CONFIGURE_ARGS+= --program-prefix= \
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--with-hwloc=external \
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--with-libltdl \
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--without-ofi \
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--enable-mpi-fortran=usempi \
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--enable-mpi-cxx \
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--enable-cxx-exceptions \
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--enable-mpi-fortran=usempif08 \
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--with-libevent=external \
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--enable-mca-no-build=verbs,btl_openib,oob_ud \
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--without-verbs \
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--with-wrapper-ldflags=-Wl,-rpath=-Wl,-rpath=${LOCALBASE}/lib/gcc${_GCC_VER} \
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ompi_cv_fortran_ignore_tkr_data=0
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--with-wrapper-ldflags=-Wl,-rpath=-Wl,-rpath=${LOCALBASE}/lib/gcc${_GCC_VER}
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CFLAGS+= ${CFLAGS_F2018}
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# See <https://github.com/open-mpi/ompi/issues/9715>
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CONFIGURE_ARGS+= --disable-io-romio
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USE_LDCONFIG= ${PREFIX}/${MPIDIR}/lib
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TEST_TARGET= check
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MANDIRS= ${PREFIX}/${MPIDIR}/share/man
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SHEBANG_FILES= ompi/mca/common/monitoring/profile2mat.pl \
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ompi/mca/common/monitoring/aggregate_profile.pl
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OPTIONS_DEFINE= AVX DEBUG IPV6 SLURM TORQUE
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OPTIONS_DEFINE= AVX DEBUG DOCS IPV6 SLURM TORQUE
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OPTIONS_DEFAULT= SLURM
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OPTIONS_EXCLUDE_aarch64= AVX
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OPTIONS_EXCLUDE_armv6= AVX SLURM
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@ -77,33 +78,20 @@ AVX_CONFIGURE_OFF= --enable-mca-no-build=op-avx
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DEBUG_CONFIGURE_ENABLE= debug
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DEBUG_INSTALL_TARGET_OFF= install-strip
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DOCS_BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}sphinx>0:textproc/py-sphinx@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}recommonmark>0:textproc/py-recommonmark@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}sphinx_rtd_theme>0:textproc/py-sphinx_rtd_theme@${PY_FLAVOR}
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DOCS_USES= python:build
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IPV6_CONFIGURE_ENABLE= ipv6
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TORQUE_CONFIGURE_WITH= tm
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TORQUE_LIB_DEPENDS= libtorque.so:sysutils/torque
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TORQUE_PLIST_FILES= ${MPIDIR}/lib/openmpi/mca_plm_tm.so \
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${MPIDIR}/lib/openmpi/mca_plm_tm.la \
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${MPIDIR}/lib/openmpi/mca_ras_tm.la \
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${MPIDIR}/lib/openmpi/mca_ras_tm.so \
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${MPIDIR}/lib/openmpi/mca_ess_tm.so \
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${MPIDIR}/lib/openmpi/mca_ess_tm.la \
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${MPIDIR}/share/openmpi/help-plm-tm.txt \
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${MPIDIR}/share/openmpi/help-ras-tm.txt
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SLURM_CONFIGURE_WITH= slurm
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SLURM_LIB_DEPENDS= libslurm.so:sysutils/slurm-wlm
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SLURM_PLIST_FILES= ${MPIDIR}/lib/openmpi/mca_ess_slurm.la \
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${MPIDIR}/lib/openmpi/mca_ess_slurm.so \
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${MPIDIR}/lib/openmpi/mca_plm_slurm.la \
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${MPIDIR}/lib/openmpi/mca_plm_slurm.so \
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${MPIDIR}/lib/openmpi/mca_ras_slurm.la \
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${MPIDIR}/lib/openmpi/mca_ras_slurm.so \
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${MPIDIR}/lib/openmpi/mca_schizo_slurm.la \
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${MPIDIR}/lib/openmpi/mca_schizo_slurm.so \
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${MPIDIR}/share/openmpi/help-plm-slurm.txt \
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${MPIDIR}/share/openmpi/help-ras-slurm.txt
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.include <bsd.port.options.mk>
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.include <bsd.port.pre.mk>
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.if ${FORTRAN_DEFAULT} == gfortran && ${GCC_DEFAULT} >= 10
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FCFLAGS+= -fallow-argument-mismatch
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@ -115,17 +103,19 @@ PLIST_SUB+= NO_MCA_PATCHER_OVERWRITE="@comment "
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PLIST_SUB+= NO_MCA_PATCHER_OVERWRITE=""
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.endif
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post-patch:
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@${REINPLACE_CMD} -e 's|$$(libdir)/pkgconfig|${LOCALBASE}/libdata/pkgconfig|g' \
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${WRKSRC}/ompi/tools/wrappers/Makefile.am \
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${WRKSRC}/ompi/tools/wrappers/Makefile.in \
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${WRKSRC}/opal/tools/wrappers/Makefile.am \
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${WRKSRC}/opal/tools/wrappers/Makefile.in \
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${WRKSRC}/orte/tools/wrappers/Makefile.am \
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${WRKSRC}/orte/tools/wrappers/Makefile.in \
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${WRKSRC}/opal/mca/pmix/pmix3x/pmix/Makefile.am \
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${WRKSRC}/opal/mca/pmix/pmix3x/pmix/Makefile.in
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@${REINPLACE_CMD} 's|define MCA_hwloc_external_.*header "|&${LOCALBASE}/include/|' \
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${WRKSRC}/configure
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.if ${COMPILER_TYPE} == clang && ${COMPILER_VERSION} >= 170
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PLIST_SUB+= SHORTFLOAT=""
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.else
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PLIST_SUB+= SHORTFLOAT="@comment "
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.endif
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.include <bsd.port.mk>
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LIBDIR2FIX= oshmem/tools/wrappers opal/tools/wrappers \
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3rd-party/openpmix ompi/tools/wrappers
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pre-configure:
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.for d in ${LIBDIR2FIX}
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${REINPLACE_CMD} -e 's|$$(libdir)/pkgconfig|${LOCALBASE}/libdata/pkgconfig|g' \
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${WRKSRC}/${d}/Makefile.in
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.endfor
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.include <bsd.port.post.mk>
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@ -1,3 +1,3 @@
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TIMESTAMP = 1677228694
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SHA256 (openmpi-4.1.5.tar.bz2) = a640986bc257389dd379886fdae6264c8cfa56bc98b71ce3ae3dfbd8ce61dbe3
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SIZE (openmpi-4.1.5.tar.bz2) = 10045426
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TIMESTAMP = 1705771645
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SHA256 (openmpi-5.0.1.tar.bz2) = e357043e65fd1b956a47d0dae6156a90cf0e378df759364936c1781f1a25ef80
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SIZE (openmpi-5.0.1.tar.bz2) = 29740669
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@ -1,20 +0,0 @@
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--- opal/mca/pmix/pmix3x/pmix/src/mca/pshmem/mmap/pshmem_mmap.c.orig 2020-04-12 11:49:10 UTC
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+++ opal/mca/pmix/pmix3x/pmix/src/mca/pshmem/mmap/pshmem_mmap.c
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@@ -79,6 +79,9 @@ static int _mmap_segment_create(pmix_pshmem_seg_t *sm_
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if (0 != (rc = posix_fallocate(sm_seg->seg_id, 0, size))) {
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pmix_output_verbose(2, pmix_globals.debug_output,
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"sys call posix_fallocate(2) fail\n");
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+ if (EINVAL == rc) {
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+ goto ftruncate;
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+ }
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if (ENOSPC == rc) {
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rc = PMIX_ERR_OUT_OF_RESOURCE;
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goto out;
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@@ -98,6 +101,7 @@ static int _mmap_segment_create(pmix_pshmem_seg_t *sm_
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goto map_memory;
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}
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#endif
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+ftruncate:
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if (0 != ftruncate(sm_seg->seg_id, size)) {
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pmix_output_verbose(2, pmix_globals.debug_output,
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"sys call ftruncate(2) fail\n");
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@ -1,8 +1,12 @@
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Open MPI is a project combining technologies and resources from several
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other projects (FT-MPI, LA-MPI, LAM/MPI, and PACX-MPI) in order to
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build the best MPI library available. A completely new MPI-2 compliant
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build the best MPI library available. A completely new MPI-3.1 compliant
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implementation, Open MPI offers advantages for system and software
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vendors, application developers and computer science researchers.
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Open MPI is based on an open component architecture allowing modular
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replacement of many system components without recompilation.
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On 32 bits platforms, please see the legacy version net/openmpi4.
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See also <https://github.com/open-mpi/ompi>.
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